PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn099081
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family MYB_related
Protein Properties Length: 87aa    MW: 10085.5 Da    PI: 10.8677
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn099081genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.21.4e-112341246
                     HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +++++ ++G++ W++Ia++++ gRt++++k+ w++
       Achn099081  2 IIQLHSRFGNR-WSKIASHFP-GRTDNEIKNCWNT 34
                     689********.*********.*********9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.72E-11141IPR009057Homeodomain-like
CDDcd001673.19E-8134No hitNo description
PROSITE profilePS5129419.362140IPR017930Myb domain
SMARTSM007171.5E-4138IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.0E-17137IPR009057Homeodomain-like
PfamPF002494.3E-10234IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    Send to blast
MIIQLHSRFG NRWSKIASHF PGRTDNEIKN CWNTRIKKKL KVLGLDPITH KPIERSRVFS  60
TKDKGVLESN SSRNQENNFE LNLHDN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002298589.12e-32hypothetical protein POPTR_0001s36220g
SwissprotQ50EX65e-23ODO1_PETHY; Protein ODORANT1
TrEMBLB9GIZ92e-32B9GIZ9_POPTR; Uncharacterized protein
STRINGPOPTR_0001s36220.15e-32(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.12e-25myb domain protein 20